Basic Information
Locus ID:
BniB01g027130.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
SOS2
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 17100372 | 17103105 | + | BniB01g027130.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 51,664.15 Da | 40.08 | 89.54 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 318 | 433 | 1.5146E-46 | - |
| Pfam | PF03822 | NAF domain | 314 | 372 | 5.1E-18 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 18 | 271 | 2.1E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 272 | 1.19E-91 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 9 | 312 | 2.7E-103 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 313 | 437 | 1.3E-50 | - |
| SMART | SM00220 | serkin_6 | 18 | 271 | 5.2E-105 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 312 | 336 | 12.536119 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 271 | 51.226574 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 56 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.1 | Protein kinase superfamily protein. encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition | 0 |
| RefSeq | XP_013743261.2 | CBL-interacting serine/threonine-protein kinase 24-like isoform X1 [Brassica napus] | 0 |
| Q9LDI3 | CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CIPK24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SJS9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_027420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology