Basic Information
Locus ID:
BniB01g025070.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 15528205 | 15533217 | + | BniB01g025070.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 106,551.64 Da | 49.69 | 83.22 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 36 | 135 | 4.6E-10 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 456 | 771 | 2.3E-98 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 450 | 810 | 1.89E-112 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 30 | 133 | 5.89E-17 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 445 | 815 | 1.9E-121 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 27 | 138 | 1.3E-15 | IPR036872 |
| SMART | SM00033 | ch_5 | 35 | 131 | 3.5E-7 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 448 | 781 | 3.8E-146 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 33 | 136 | 17.346752 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 450 | 773 | 105.441017 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 673 | 684 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 643 | 660 | 1.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 723 | 744 | 1.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 674 | 692 | 1.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 525 | 546 | 1.2E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 857 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 907 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 939 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 945 | - | - |
| Coils | Coil | Coil | 430 | 450 | - | - |
| Coils | Coil | Coil | 376 | 396 | - | - |
| Coils | Coil | Coil | 787 | 814 | - | - |
| Coils | Coil | Coil | 280 | 321 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41310.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_013634848.1 | PREDICTED: LOW QUALITY PROTEIN: kinesin-4 [Brassica oleracea var. oleracea] | 0 |
| F4JX00 | Kinesin-like protein KIN-14K OS=Arabidopsis thaliana OX=3702 GN=KIN14K PE=3 SV=2 | 0 | |
| TrEMBL | A0A8X7VAT7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_027609 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology