Basic Information
Locus ID:
BniB01g025030.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 15495734 | 15497098 | + | BniB01g025030.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 49,614.34 Da | 53.86 | 86.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 13 | 87 | 6.07103E-18 | - |
| Pfam | PF02214 | BTB/POZ domain | 13 | 96 | 8.2E-13 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 11 | 95 | 5.61E-16 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 117 | 339 | 2.26E-9 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 134 | 452 | 6.3E-7 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 4 | 102 | 1.6E-17 | IPR011333 |
| SMART | SM00225 | BTB_4 | 11 | 105 | 1.1E-4 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_048633474.1 | BTB/POZ domain-containing protein At5g41330-like [Brassica napus] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VAV8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_027612 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology