Basic Information
Locus ID:
BniB01g016870.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CIPK3
Description:
CBL-interacting serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 9356757 | 9359119 | + | BniB01g016870.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 50,252.90 Da | 37.60 | 82.16 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 313 | 422 | 1.48588E-46 | - |
| CDD | cd14663 | STKc_SnRK3 | 13 | 268 | 3.31875E-171 | - |
| Pfam | PF03822 | NAF domain | 309 | 368 | 4.9E-19 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 14 | 269 | 2.2E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 279 | 7.82E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 306 | 431 | 2.0E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 298 | 1.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 93 | 9.1E-33 | - |
| SMART | SM00220 | serkin_6 | 14 | 269 | 8.2E-108 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 269 | 51.452721 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 307 | 331 | 12.992916 | IPR018451 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 133 | 145 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_013635912.1 | PREDICTED: CBL-interacting serine/threonine-protein kinase 3 [Brassica oleracea var. oleracea] | 0 |
| Q2V452 | CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CIPK3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A397ZU67 | non-specific serine/threonine protein kinase OS=Brassica campestris OX=3711 GN=BRAA04T17626Z PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology