Basic Information
Locus ID:
BniB01g015710.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 8635463 | 8641680 | - | BniB01g015710.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 96,091.76 Da | 38.01 | 75.49 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 73 | 404 | 1.3257E-71 | IPR034161 |
| CDD | cd05476 | pepsin_A_like_plant | 506 | 836 | 4.30983E-77 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 684 | 832 | 2.1E-19 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 507 | 661 | 1.1E-39 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 254 | 400 | 4.9E-21 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 74 | 230 | 1.8E-37 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 65 | 404 | 2.04E-77 | IPR021109 |
| SUPERFAMILY | SSF50630 | Acid proteases | 502 | 836 | 1.75E-79 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 666 | 841 | 3.6E-34 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 235 | 406 | 5.2E-34 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 484 | 661 | 1.2E-44 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 55 | 230 | 2.8E-44 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 507 | 832 | 39.323017 | IPR033121 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 74 | 400 | 36.800484 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 713 | 724 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28040.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_013633291.1 | PREDICTED: LOW QUALITY PROTEIN: aspartic proteinase CDR1 [Brassica oleracea var. oleracea] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VBT0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_028196 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology