Basic Information
Locus ID:
BniB01g011350.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 5778984 | 5779915 | - | BniB01g011350.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 28,751.77 Da | 50.74 | 91.49 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 199 | 219 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49790.1 | F-box associated ubiquitination effector family protein. | 0 |
| RefSeq | XP_009141277.1 | F-box/LRR-repeat protein At2g43260 [Brassica rapa] | 0 |
| A8MS20 | F-box protein At2g43440 OS=Arabidopsis thaliana OX=3702 GN=At2g43440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VCK1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_028633 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 8 | AT1G49790.2, AT2G30615.1, AT2G42955.1, AT2G43260.1 ... |
| Brassicaceae | Eutrema salsugineum | 8 | Thhalv10001524m.g.v1.0, Thhalv10005447m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g31660.v2.2 |
| Brassicaceae | Brassica nigra | 11 | BniB01g002760.2N, BniB01g011350.2N, BniB02g072460.2N ... |