Basic Information
Locus ID:
BniB01g010240.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 5222558 | 5223007 | + | BniB01g010240.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 17,500.18 Da | 76.78 | 94.83 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33855.1 | 0 | |
| RefSeq | XP_018484355.1 | PREDICTED: uncharacterized protein LOC108855126 [Raphanus sativus] | 0 |
| TrEMBL | A0A6J0NIH3 | uncharacterized protein LOC108855126 OS=Raphanus sativus OX=3726 GN=LOC108855126 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20256 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22215 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g182570 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg41306, Sbi_jg48822 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28055 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017086 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl45991, Sgl50687 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032833 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.8AG0005760, CQ.Regalona.r1.8AG0005780 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30073100 |
| Apiaceae | Apium graveolens | 1 | Ag8G00897 |
| Arecaceae | Cocos nucifera | 1 | COCNU_11G006790 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103711403 |
| Asteraceae | Flaveria trinervia | 1 | FtriNA16905 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G33855.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017644m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g16270.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB01g010240.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno16g03330 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g07430 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005653 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4070, BH09.1456, CH09.1566 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0313710, gene-QOZ80_4BG0344850 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0175070.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco07G008460, Oco08G008340 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g39950.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G132600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0302324 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr23G010720, Chr26G009020 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G584200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG048820, gene_TRIDC2BG051420 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G328700.1.cds1, TraesCS2B02G353600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb079820_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-36873 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19907 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc09g05910, gene.Posoc09g05930 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.625 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-7176 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-19021, nbisL1-mrna-20145 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12258 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000005l.23 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00008419 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16878 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22054 |
| Salicaceae | Populus euphratica | 1 | populus_peu10023 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623759 |
| Solanaceae | Solanum chilense | 1 | SOLCI000847500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011973 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.18008_chr09_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G2033 |
| Zosteraceae | Zostera marina | 1 | Zosma05g04380.v3.1 |