Basic Information
Locus ID:
BniB01g009280.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 4759792 | 4762492 | - | BniB01g009280.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 92,428.26 Da | 51.90 | 71.11 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00564 | PB1 domain | 173 | 204 | 2.6E-5 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 534 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_018483437.1 | PREDICTED: uncharacterized protein LOC108854392 [Raphanus sativus] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0NFB3 | uncharacterized protein LOC108854392 OS=Raphanus sativus OX=3726 GN=LOC108854392 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology