halophFGD

Basic Information

Locus ID: BniB01g008570.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: Targeting protein for Xklp2 (TPX2)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B1	4432073	4432792	+	BniB01g008570.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.22	20,026.81 Da	35.35	84.07	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	106	135	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT2G35880.1	TPX2 (targeting protein for Xklp2) protein family.
RefSeq	XP_018476890.1	PREDICTED: protein WVD2-like 4 isoform X2 [Raphanus sativus]
Swiss-Prot	Q9SJ62	Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2
TrEMBL	A0A8X7VCZ2	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_028886 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg24008, jg31890, jg32750, jg36592, jg3688, jg4618
Aizoaceae	Mesembryanthemum crystallinum	2	gene_15274, gene_25183
Amaranthaceae	Atriplex hortensis	2	Ah003064, Ah034699
Amaranthaceae	Beta vulgaris	2	BVRB_2g030310, BVRB_5g108930
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg15795, Sbi_jg21821, Sbi_jg29474, Sbi_jg56575
Amaranthaceae	Salicornia europaea	2	Seu_jg13795, Seu_jg15929
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001878, GOSA_00008549
Amaranthaceae	Suaeda glauca	5	Sgl51349, Sgl56596, Sgl63225, Sgl63360, Sgl67837
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007337, gene:ENSEOMG00000017582 ... gene:ENSEOMG00000019064, gene:ENSEOMG00000022932, gene:ENSEOMG00000026033, gene:ENSEOMG00000051714
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1BG0021230, CQ.Regalona.r1.2AG0022940 ... CQ.Regalona.r1.5AG0011440, CQ.Regalona.r1.5BG0011910
Anacardiaceae	Pistacia vera	6	pistato.v30121360, pistato.v30142280, pistato.v30200760 ... pistato.v30250060, pistato.v30276960, pistato.v30291030
Apiaceae	Apium graveolens	5	Ag10G02112, Ag2G01852, Ag3G00684, Ag4G01411, Ag7G01911
Arecaceae	Cocos nucifera	1	COCNU_03G000140
Arecaceae	Phoenix dactylifera	3	gene-LOC103697580, gene-LOC103707486, gene-LOC120106060
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.3359.V1.1, AsparagusV1_01.3360.V1.1 ... AsparagusV1_05.1662.V1.1
Asteraceae	Flaveria trinervia	7	Ftri12G00442, Ftri16G11879, Ftri16G18019, Ftri17G08384 ... Ftri2G28616, Ftri2G32507, Ftri6G15947
Brassicaceae	Arabidopsis thaliana	3	AT2G25480.1, AT2G35880.1, AT4G32330.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10016634m.g.v1.0, Thhalv10025240m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp4g04690.v2.2, Sp4g18130.v2.2, Sp7g30090.v2.2
Brassicaceae	Brassica nigra	6	BniB01g008570.2N, BniB02g085840.2N, BniB03g010000.2N ... BniB05g005720.2N, BniB06g008160.2N, BniB08g022550.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq04G1253, Ceq04G2343
Casuarinaceae	Casuarina glauca	2	Cgl04G1414, Cgl04G2548
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno01g00110
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g29360, gene.Thate03g04590
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-295, nbisL1-mrna-8515
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.1875, evm.TU.LG07.1448
Plantaginaceae	Plantago ovata	2	Pov_00003627, Pov_00013312
Plumbaginaceae	Limonium bicolor	2	Lb1G05003, Lb4G24254
Poaceae	Echinochloa crus-galli	10	AH04.1686, AH06.2247, AH07.741, AH07.746, BH04.1679 ... BH06.1987, BH07.872, CH04.1915, CH06.2266, CH07.629
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0105320, gene-QOZ80_2BG0158790 ... gene-QOZ80_6AG0544500, gene-QOZ80_6BG0498050, gene-QOZ80_9AG0685080, gene-QOZ80_9BG0711150
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.4HG0360730.1, HORVU.MOREX.r3.6HG0578610.1 ... HORVU.MOREX.r3.7HG0720080.1
Poaceae	Lolium multiflorum	3	gene-QYE76_021378, gene-QYE76_034990, gene-QYE76_066494
Poaceae	Oryza coarctata	6	Oco03G004660, Oco04G005240, Oco11G012620, Oco12G012640 ... Oco21G007400, Oco22G008560
Poaceae	Oryza sativa	3	LOC_Os02g10690.1, LOC_Os06g40450.2, LOC_Os11g36340.1
Poaceae	Paspalum vaginatum	3	gene-BS78_04G077000, gene-BS78_05G171300 ... gene-BS78_10G186200
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0103141, Pt_Chr0202105, Pt_Chr0400690
Poaceae	Sporobolus alterniflorus	10	Chr01G008170, Chr06G032990, Chr07G016030, Chr0G007970 ... Chr10G017690, Chr11G004920, Chr15G024350, Chr16G005630, Chr17G005050, Chr31G006890
Poaceae	Thinopyrum elongatum	3	Tel4E01G255800, Tel6E01G360400, Tel7E01G640900
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG023570, gene_TRIDC4BG026910 ... gene_TRIDC6AG026400, gene_TRIDC6BG032470, gene_TRIDC7AG052740, gene_TRIDC7BG045260
Poaceae	Triticum aestivum	9	TraesCS4A02G148200.1, TraesCS4D02G155800.2 ... TraesCS6A02G182000.2, TraesCS6B02G210800.2, TraesCS6D02G169300.2, TraesCS7A02G377800.1, TraesCS7B02G279500.1, TraesCS7D02G374600.1, TraesCSU02G139700.3
Poaceae	Zea mays	7	Zm00001eb114200_P006, Zm00001eb200130_P003 ... Zm00001eb205790_P001, Zm00001eb235840_P001, Zm00001eb276570_P001, Zm00001eb333920_P001, Zm00001eb386490_P003
Poaceae	Zoysia japonica	6	nbis-gene-33455, nbis-gene-41056, nbis-gene-44058 ... nbis-gene-44223, nbis-gene-45783, nbis-gene-55656
Poaceae	Zoysia macrostachya	5	Zma_g12400, Zma_g15147, Zma_g18088, Zma_g18980, Zma_g33042
Portulacaceae	Portulaca oleracea	6	evm.TU.LG03.2501, evm.TU.LG04.2750, evm.TU.LG08.410 ... evm.TU.LG17.1545, evm.TU.LG18.493, evm.TU.LG26.542
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g00280
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_1_RagTag.1312, evm.TU.Scaffold_2_RagTag.1079
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-13625, nbisL1-mrna-4110, nbisL1-mrna-6285
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-14677, nbisL1-mrna-18104, nbisL1-mrna-18145
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-10179, nbisL1-mrna-4130, nbisL1-mrna-9101
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000004l.169, evm.TU.utg000009l.600 ... evm.TU.utg000016l.385
Rhizophoraceae	Kandelia obovata	3	Maker00003968, Maker00005478, Maker00016521
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-3775, nbisL1-mrna-7555
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-13490, nbisL1-mrna-5678, nbisL1-mrna-7862
Salicaceae	Populus euphratica	6	populus_peu04759, populus_peu04760, populus_peu12384 ... populus_peu12385, populus_peu12898, populus_peu25995
Solanaceae	Lycium barbarum	4	gene-LOC132607243, gene-LOC132625949, gene-LOC132636207 ... gene-LOC132639883
Solanaceae	Solanum chilense	4	SOLCI001893300, SOLCI003137600, SOLCI005760000 ... SOLCI006859400
Solanaceae	Solanum pennellii	4	gene-LOC107002716, gene-LOC107008107, gene-LOC107023130 ... gene-LOC107028792
Tamaricaceae	Reaumuria soongarica	2	STRG.24994_chr08_+, STRG.32921_chr09_-
Tamaricaceae	Tamarix chinensis	3	TC01G1513, TC02G0507, TC05G2721
Zosteraceae	Zostera marina	2	Zosma04g00570.v3.1, Zosma05g33230.v3.1