Basic Information
Locus ID:
BniB01g006420.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
pect1 pect1 (phosphorylethanolamine cytidylyltransferase 1)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 3183274 | 3186211 | - | BniB01g006420.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 46,422.47 Da | 41.08 | 87.41 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02173 | ECT | 249 | 401 | 1.36227E-81 | - |
| CDD | cd02174 | CCT | 51 | 202 | 2.67021E-82 | IPR041723 |
| Pfam | PF01467 | Cytidylyltransferase-like | 254 | 346 | 1.1E-14 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 56 | 184 | 8.6E-27 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 251 | 386 | 3.33E-23 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 54 | 187 | 3.26E-29 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 45 | 217 | 2.9E-56 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 221 | 415 | 1.8E-54 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 54 | 119 | 5.4E-20 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 252 | 319 | 1.0E-17 | IPR004821 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 222 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_013637537.1 | PREDICTED: ethanolamine-phosphate cytidylyltransferase-like [Brassica oleracea var. oleracea] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7REE0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_044922 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology