Basic Information
Locus ID:
BniB01g006030.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 3026954 | 3028595 | - | BniB01g006030.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 49,432.81 Da | 42.26 | 83.97 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 128 | 382 | 4.72501E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 102 | 376 | 1.3E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 77 | 380 | 3.15E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 182 | 7.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 402 | 2.0E-63 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 382 | 40.21619 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 131 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 63 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009141783.1 | serine/threonine-protein kinase PCRK1 [Brassica rapa] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7RM41 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_050375 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology