Basic Information
Locus ID:
BniB01g004330.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2 ). Among the enzymes to be stimulated by the calmodulin-Ca(2 ) complex are a number of protein kinases and phosphatases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 2175043 | 2175533 | - | BniB01g004330.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 12,890.35 Da | 32.96 | 73.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 22 | 62 | 1.51583E-10 | IPR002048 |
| CDD | cd00051 | EFh | 64 | 113 | 4.15624E-13 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 21 | 62 | 1.6E-6 | IPR002048 |
| Pfam | PF00036 | EF hand | 64 | 86 | 5.4E-6 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 19 | 110 | 4.45E-26 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 65 | 114 | 1.2E-15 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 18 | 64 | 4.9E-15 | - |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 64 | 90 | 12.114401 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 68 | 80 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
ko04014 (Ras signaling pathway)
map04014 (Ras signaling pathway)
ko04015 (Rap1 signaling pathway)
map04015 (Rap1 signaling pathway)
ko04016 (MAPK signaling pathway - plant)
map04016 (MAPK signaling pathway - plant)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66410.3 | - | 0 |
| RefSeq | XP_008810798.1 | calmodulin-7-like [Phoenix dactylifera] | 0 |
| P04464 | Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3 | 0 | |
| TrEMBL | Q6DN30 | Calmodulin cam-206 OS=Daucus carota OX=4039 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology