Basic Information
Locus ID:
BniB01g003840.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CPK14
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 1938655 | 1940953 | + | BniB01g003840.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 60,160.32 Da | 34.28 | 86.46 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 54 | 312 | 6.45444E-136 | - |
| CDD | cd00051 | EFh | 432 | 494 | 2.26376E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 361 | 420 | 1.3E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 431 | 494 | 4.1E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 55 | 313 | 3.4E-76 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 321 | 2.56E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 520 | 9.22E-44 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 140 | 7.1E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 497 | 1.5E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 1.1E-58 | - |
| SMART | SM00054 | efh_1 | 468 | 496 | 6.8E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 432 | 460 | 1.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 360 | 388 | 4.1 | IPR002048 |
| SMART | SM00220 | serkin_6 | 55 | 313 | 1.0E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 396 | 424 | 0.53 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 49.106476 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 9.966455 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 392 | 427 | 9.436442 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 13.760229 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 464 | 499 | 13.425486 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 88 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 477 | 489 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 405 | 417 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41860.1 | calcium-dependent protein kinase 14. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_013747405.1 | calcium-dependent protein kinase 14-like [Brassica napus] | 0 |
| P93759 | Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CPK14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VDX3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_029211 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology