Basic Information
Locus ID:
BniB01g002530.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Something about silencing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 1271409 | 1272431 | - | BniB01g002530.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 18,438.60 Da | 50.70 | 84.67 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 60 | 80 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43650.1 | Sas10/U3 ribonucleoprotein (Utp) family protein. | 0 |
| RefSeq | XP_010508392.1 | PREDICTED: something about silencing protein 10-like isoform X2 [Camelina sativa] | 0 |
| Q8L3P4 | Protein THALLO OS=Arabidopsis thaliana OX=3702 GN=THAL PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VDU5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_029335 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB01g002530.2N |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG06.756, evm.TU.LG11.537, evm.TU.LG13.1229 ... |