Basic Information
Locus ID:
BniB01g000950.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 487546 | 489274 | + | BniB01g000950.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 61,077.37 Da | 45.65 | 86.44 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 112 | 177 | 3.17054E-5 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 252 | 495 | 2.4E-55 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 37 | 104 | 2.5E-14 | IPR000626 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 545 | 3.06E-6 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 86 | 179 | 4.6E-13 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 27 | 105 | 1.06E-13 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 110 | 181 | 1.5E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 29 | 109 | 1.8E-12 | - |
| SMART | SM00213 | ubq_7 | 108 | 179 | 1.5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 32 | 103 | 0.032 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 98 | 183 | 10.331637 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 34 | 103 | 12.92291 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_013750940.2 | phosphatidylinositol 4-kinase gamma 4-like [Brassica napus] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A397ZQ46 | 1-phosphatidylinositol 4-kinase OS=Brassica campestris OX=3711 GN=BRARA_D02798 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology