Basic Information
Locus ID:
BVRB_9g222500
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 43289390 | 43290314 | + | BVRB_9g222500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 4,161.72 Da | 44.34 | 44.25 | -0.52 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01524 (Platinum drug resistance)
map01524 (Platinum drug resistance)
ko02020 (Two-component system)
map02020 (Two-component system)
map04115 (p53 signaling pathway)
map04210 (Apoptosis)
ko04214 (Apoptosis - fly)
map04214 (Apoptosis - fly)
ko04215 (Apoptosis - multiple species)
map04215 (Apoptosis - multiple species)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22840.2 | CYTOCHROME C-1. Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers. | 0 |
| RefSeq | XP_021717180.1 | cytochrome c [Chenopodium quinoa] | 0 |
| P00073 | Cytochrome c OS=Spinacia oleracea OX=3562 PE=1 SV=1 | 0 | |
| TrEMBL | W4ZNQ8 | Cytochrome c domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg26011, jg26012, jg31188 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_24234, gene_24235 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah016032, Ah026551, Ah026552 |
| Amaranthaceae | Beta vulgaris | 4 | BVRB_6g137470, BVRB_6g137480, BVRB_8g192530, BVRB_9g222500 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg14738, Sbi_jg5144, Sbi_jg55515 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg13133, Seu_jg26066 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00023105, GOSA_00023106, GOSA_00023107, GOSA_00027953 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl34757, Sgl34758, Sgl40128, Sgl40129, Sgl43991, Sgl48760 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000000066, gene:ENSEOMG00000002549 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.6AG0017760, CQ.Regalona.r1.6BG0018860 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30147680, pistato.v30207720 |
| Apiaceae | Apium graveolens | 7 | Ag10G00023, Ag3G02211, Ag4G00489, Ag7G02002, Ag9G00213 ... |
| Arecaceae | Cocos nucifera | 3 | COCNU_05G001370, scaffold001189G000010 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103702702 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.2547.V1.1, AsparagusV1_03.678.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri17G14209, FtriNA18279 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0759 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0769 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG02.2308, evm.TU.LG10.188 |
| Plantaginaceae | Plantago ovata | 8 | Pov_00001721, Pov_00004644, Pov_00012402, Pov_00012412 ... |
| Poaceae | Echinochloa crus-galli | 1 | BH01.556 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0213970, gene-QOZ80_3BG0259090 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0514220.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco05G025010 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g56500.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G063000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106960 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G029790, Chr07G028860 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G646900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG059590, gene_TRIDC5BG063780 |
| Poaceae | Triticum aestivum | 2 | TraesCS5A02G411600.1.cds1, TraesCS5D02G420400.1.cds1 |
| Poaceae | Zea mays | 4 | Zm00001eb213720_P001, Zm00001eb250170_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-16350 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2656 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_15_RagTag.306, evm.TU.Scaffold_3_RagTag.272 ... |
| Rhizophoraceae | Carallia pectinifolia | 5 | nbisL1-mrna-17131, nbisL1-mrna-26555, nbisL1-mrna-26581 ... |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-21188, nbisL1-mrna-3140, nbisL1-mrna-9570 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-11803, nbisL1-mrna-17606, nbisL1-mrna-6008 |
| Rhizophoraceae | Kandelia candel | 3 | add.evm.TU.utg000001l.88, evm.TU.utg000011l.1213 ... |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00004721, Maker00012860 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-15586, nbisL1-mrna-6480 |
| Rhizophoraceae | Rhizophora mangle | 4 | nbisL1-mrna-2304, nbisL1-mrna-2654, nbisL1-mrna-3098 ... |
| Salicaceae | Populus euphratica | 3 | populus_peu14234, populus_peu23555, populus_peu23556 |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132622076, gene-LOC132622110, gene-LOC132625247 ... |
| Solanaceae | Solanum chilense | 6 | SOLCI000493100, SOLCI000706800, SOLCI000814900 ... |
| Solanaceae | Solanum pennellii | 7 | gene-LOC107009250, gene-LOC107010463, gene-LOC107010556 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2049 |