Basic Information
Locus ID:
BVRB_9g221270
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 41889991 | 41893300 | - | BVRB_9g221270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 32,197.62 Da | 33.77 | 57.17 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 23 | 287 | 1.5E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 178 | 278 | 1.67E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 172 | 291 | 5.1E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 178 | 279 | 26.24703 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_010691372.2 | auxin-responsive protein IAA27 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R4K3I4 | Auxin-responsive protein OS=Bassia scoparia OX=83154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology