Basic Information
Locus ID:
BVRB_9g218390
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Cell division cycle-associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 38781706 | 38784710 | - | BVRB_9g218390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 44,933.54 Da | 61.84 | 59.01 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10497 | Zinc-finger domain of monoamine-oxidase A repressor R1 | 194 | 286 | 1.3E-32 | IPR018866 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 114 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23530.1 | Zinc-finger domain of monoamine-oxidase A repressor R1. | 0 |
| RefSeq | XP_010690982.1 | cell division cycle-associated 7-like protein [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9RI46 | zf-4CXXC_R1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_069340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg17480 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_16488, gene_26379 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah010346, Ah024632 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_6g134760, BVRB_9g218390 |
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg12521, Sbi_jg13362, Sbi_jg13364, Sbi_jg45792 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg20151, Seu_jg9358, Seu_jg9360 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00010283, GOSA_00019707 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl33792, Sgl33804, Sgl39171, Sgl45391, Sgl50183 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000003377, gene:ENSEOMG00000004066 ... |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.5AG0019540, CQ.Regalona.r1.6AG0024530 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30207040 |
| Apiaceae | Apium graveolens | 4 | Ag5G00241, Ag5G00242, Ag7G01275, AgUnG00070 |
| Arecaceae | Cocos nucifera | 1 | COCNU_05G000050 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103707543 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_08.1377.V1.1, AsparagusV1_08.1446.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri14G24981, Ftri18G24907, Ftri7G00032 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G23530.1, AT4G37110.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10000497m.g.v1.0, Thhalv10025333m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g02500.v2.2, Sp7g34660.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g020270.2N, BniB05g001840.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1655 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1697 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g03600 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0064s00025.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g05410, gene.Thate05g15310 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.2214 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00029328 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G05972, Lb8G35906 |
| Poaceae | Echinochloa crus-galli | 3 | AH04.1671, BH04.1664, CH04.1902 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0029730, gene-QOZ80_9AG0685240 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0239970.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_066518 |
| Poaceae | Oryza coarctata | 2 | Oco06G018530, Oco21G007340 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g37570.1, LOC_Os11g36030.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G181500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0103135 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr07G016090, Chr16G005710, Chr17G005110, Chr31G006870 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G209600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG015180, gene_TRIDC3BG019750 |
| Poaceae | Triticum aestivum | 4 | TraesCS3A02G121700.1, TraesCS3B02G141100.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb114140_P001, Zm00001eb191630_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-44228, nbis-gene-45780 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18975 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG05.618, evm.TU.LG06.733, evm.TU.LG08.1877 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g06980 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.2142, evm.TU.Scaffold_3_RagTag.313 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-553, nbisL1-mrna-5950, nbisL1-mrna-635 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1698 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6036 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000016l.183, evm.TU.utg000019l.1058 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012646 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-6461 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2271 |
| Salicaceae | Populus euphratica | 3 | populus_peu14266, populus_peu23467, populus_peu36403 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132615811, gene-LOC132621974 |
| Solanaceae | Solanum chilense | 2 | SOLCI001646400, SOLCI003385600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107006729, gene-LOC107009091 |
| Tamaricaceae | Reaumuria soongarica | 4 | STRG.1074_chr01_+, STRG.4371_chr03_+, gene_11723, gene_2798 |
| Tamaricaceae | Tamarix chinensis | 4 | TC04G2160, TC05G0857, TC10G0539, TC11G0511 |
| Zosteraceae | Zostera marina | 1 | Zosma03g02860.v3.1 |