Basic Information
Locus ID:
BVRB_9g216600
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 37018782 | 37025162 | + | BVRB_9g216600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 41,000.88 Da | 36.15 | 76.00 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 309 | 356 | 6.8E-10 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 297 | 360 | 1.21E-14 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 257 | 1.51E-25 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 44 | 270 | 9.0E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 291 | 367 | 2.9E-14 | - |
| SMART | SM00326 | SH3_2 | 304 | 359 | 1.2E-10 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 301 | 360 | 18.568092 | IPR001452 |
| Coils | Coil | Coil | 243 | 263 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
| Coils | Coil | Coil | 148 | 175 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_010690773.1 | SH3 domain-containing protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QN64 | SH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology