Basic Information
Locus ID:
BVRB_9g214880
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 35056016 | 35060050 | - | BVRB_9g214880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 103,576.86 Da | 35.19 | 90.42 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 600 | 870 | 1.65031E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 595 | 868 | 1.4E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 333 | 370 | 0.16 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 153 | 1.7E-7 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 396 | 440 | 2.0E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 2.7E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 447 | 7.31E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 574 | 879 | 2.47E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 557 | 671 | 3.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 457 | 5.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 331 | 4.7E-81 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 672 | 886 | 5.8E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 264 | 287 | 93.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 395 | 419 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 115 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 0.0024 | IPR003591 |
| SMART | SM00220 | serkin_6 | 594 | 874 | 3.8E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 140 | 164 | 56.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 594 | 874 | 40.569538 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 719 | 731 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 600 | 632 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010690479.2 | receptor protein kinase TMK1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology