Basic Information
Locus ID:
BVRB_9g212250
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 30264314 | 30266022 | - | BVRB_9g212250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 23,626.95 Da | 55.04 | 75.54 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 43 | 86 | 2.71732E-18 | - |
| Pfam | PF13639 | Ring finger domain | 43 | 86 | 2.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 37 | 92 | 1.26E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 93 | 1.7E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 44 | 85 | 1.2E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 44 | 86 | 12.799091 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 124 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010690208.2 | E3 ubiquitin-protein ligase RING1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8LFY8 | RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QED1 | RING-type E3 ubiquitin transferase OS=Spinacia oleracea OX=3562 GN=SOVF_194000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology