Basic Information
Locus ID:
BVRB_9g211720
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 29075313 | 29080037 | + | BVRB_9g211720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 64,673.35 Da | 37.72 | 101.29 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 50 | 4.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 56 | 2.35E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 135 | 349 | 6.67E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 52 | 1.5E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 105 | 388 | 1.7E-16 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 49 | 9.656436 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22610.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_019107445.2 | uncharacterized protein LOC104903704 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FLA2 | Putative F-box/FBD/LRR-repeat protein At5g44950 OS=Arabidopsis thaliana OX=3702 GN=At5g44950 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0K9RXB9 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_018110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology