Basic Information
Locus ID:
BVRB_9g208770
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 19887977 | 19905774 | - | BVRB_9g208770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 89,300.32 Da | 52.68 | 87.34 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 104 | 123 | 0.19 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 131 | 185 | 5.3E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 536 | 807 | 5.2E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 77 | 6.6E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 512 | 807 | 2.25E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 244 | 9.23E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 496 | 610 | 7.5E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 256 | 6.4E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 611 | 822 | 1.0E-51 | - |
| SMART | SM00369 | LRR_typ_2 | 148 | 171 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 196 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 125 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 533 | 811 | 34.364712 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 172 | 185 | 9.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 105 | 118 | 9.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_048492763.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4S6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology