Basic Information
Locus ID:
BVRB_9g206520
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 9460249 | 9463621 | + | BVRB_9g206520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 42,642.08 Da | 32.86 | 91.57 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 196 | 325 | 4.9E-12 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 35 | 108 | 4.8E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 30 | 171 | 2.88E-18 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 181 | 326 | 7.06E-16 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 24 | 170 | 3.3E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 188 | 326 | 5.6E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 222 | 326 | 7.6E-14 | IPR000782 |
| SMART | SM00554 | fasc_3 | 60 | 174 | 2.7 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 24 | 171 | 12.654673 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 184 | 323 | 8.936207 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 379 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_010689281.2 | fasciclin-like arabinogalactan protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8BLI2 | Fasciclin-like arabinogalactan protein 2 OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g206520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology