Basic Information
Locus ID:
BVRB_9g205900
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 7989827 | 7994171 | - | BVRB_9g205900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 19,957.94 Da | 55.75 | 55.78 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 113 | 169 | 1.1E-24 | IPR039512 |
| Pfam | PF13639 | Ring finger domain | 65 | 108 | 1.1E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 64 | 112 | 9.81E-8 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 2 | 59 | 3.14E-19 | IPR037275 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 111 | 1.5E-8 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 136 | 173 | 9.6E-18 | - |
| SMART | SM00184 | ring_2 | 66 | 108 | 6.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 66 | 108 | 11.058237 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1 | 65 | 33.740265 | IPR017921 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_010689159.2 | - | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MGQ9 | E3 ubiquitin-protein ligase MIEL1-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology