Basic Information
Locus ID:
BVRB_9g204860
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 4467540 | 4481722 | - | BVRB_9g204860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.60 | 51,614.07 Da | 44.28 | 70.28 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 213 | 360 | 4.7316E-36 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 216 | 360 | 8.3E-25 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 197 | 380 | 3.15E-41 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 168 | 451 | 4.1E-85 | IPR016135 |
| SMART | SM00212 | ubc_7 | 214 | 371 | 5.7E-23 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 211 | 371 | 35.757244 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 73 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53025.1 | Ubiquitin-conjugating enzyme family protein. | 0 |
| RefSeq | XP_010689010.1 | putative ubiquitin-conjugating enzyme E2 38 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9C918 | Putative ubiquitin-conjugating enzyme E2 38 OS=Arabidopsis thaliana OX=3702 GN=UBC38 PE=3 SV=2 | 0 | |
| TrEMBL | A0A7C8Z5A0 | E2 ubiquitin-conjugating enzyme OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology