Basic Information
Locus ID:
BVRB_8g196710
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 36252158 | 36256142 | - | BVRB_8g196710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 96,252.20 Da | 44.73 | 75.25 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 526 | 751 | 1.1E-70 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 338 | 484 | 1.1E-56 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 215 | 275 | 2.5E-15 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 543 | 717 | 3.6E-196 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 335 | 754 | 3.6E-196 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 819 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 825 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 317 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_010688233.1 | uncharacterized protein LOC104902231 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZA4 | ribonuclease P OS=Spinacia oleracea OX=3562 GN=SOVF_011940 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology