Basic Information
Locus ID:
BVRB_8g195060
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Protein of unknown function (DUF1644)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 34163303 | 34166912 | + | BVRB_8g195060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 38,173.88 Da | 70.25 | 51.95 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07800 | Protein of unknown function (DUF1644) | 46 | 230 | 6.9E-70 | IPR012866 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 204 | 5.0E-6 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 327 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25910.1 | Protein of unknown function (DUF1644). | 0 |
| RefSeq | XP_048490240.1 | - | 0 |
| TrEMBL | A0A0K9QI00 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg13516 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10662 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014421 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g195060 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40782, Sbi_jg50762 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2316 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007914 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42088, Sgl46861 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010736, gene:ENSEOMG00000030392 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0021210, CQ.Regalona.r1.8BG0021160 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30127680, pistato.v30128720, pistato.v30255580 |
| Apiaceae | Apium graveolens | 2 | Ag2G02812, Ag4G01532 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G000300, COCNU_14G000150 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103698893, gene-LOC103721295 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.710.V1.1 |
| Asteraceae | Flaveria trinervia | 5 | Ftri14G22007, Ftri15G24297, Ftri3G24700, Ftri4G22677 ... |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G25910.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10004489m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g15150.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g066540.2N, BniB04g008160.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq04G0557, Ceq06G0667 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl04G0662, Cgl06G0691 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g32710 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-101 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.440, evm.TU.LG07.996 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00000906, Pov_00005446, Pov_00015464 |
| Poaceae | Echinochloa crus-galli | 5 | AH02.2314, AH02.2315, AH06.1438, BH02.2421, CH02.2598 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0024280, gene-QOZ80_1BG0074970 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0271250.2.CDS2 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_053754 |
| Poaceae | Oryza coarctata | 2 | Oco01G014420, Oco02G014690 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g42700.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G193300 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G015580, Chr03G010970, Chr05G018230, Chr08G011120 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G376700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG032850, gene_TRIDC3BG037340 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G219400.1.cds1, TraesCS3B02G249800.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb161920_P001, Zm00001eb358060_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29264, nbis-gene-29517 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10647, Zma_g8205 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG23.1160 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc08g15660 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_10_RagTag.355, evm.TU.Scaffold_4_RagTag.1985 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-13186, nbisL1-mrna-13214 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15028, nbisL1-mrna-3725 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-16758, nbisL1-mrna-4763 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.427, evm.TU.utg000033l.237 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00001376, Maker00015080 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-22492, nbisL1-mrna-23489 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-14729, nbisL1-mrna-21017 |
| Salicaceae | Populus euphratica | 2 | populus_peu05086, populus_peu09174 |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132598647, gene-LOC132601670, gene-LOC132603657 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI001600100, SOLCI004505400, SOLCI004752900 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107005795, gene-LOC107007308, gene-LOC107021203 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.1604_chr01_-, STRG.3625_chr02_- |
| Tamaricaceae | Tamarix chinensis | 2 | TC10G1672, TC12G1219 |