Basic Information
Locus ID:
BVRB_8g191130
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28757101 | 28769531 | + | BVRB_8g191130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 200,248.28 Da | 47.78 | 80.47 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 369 | 641 | 1.75462E-118 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1507 | 1770 | 2.78242E-147 | IPR044769 |
| Pfam | PF01363 | FYVE zinc finger | 30 | 98 | 1.1E-16 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1546 | 1712 | 8.1E-33 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1713 | 1768 | 5.1E-7 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 393 | 630 | 2.1E-31 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 435 | 607 | 2.33E-41 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 28 | 100 | 1.15E-18 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1501 | 1770 | 6.47E-79 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 20 | 105 | 3.0E-20 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 434 | 607 | 1.2E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1484 | 1627 | 1.3E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1629 | 1771 | 8.3E-42 | - |
| SMART | SM00064 | fyve_4 | 25 | 100 | 1.2E-20 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1483 | 1771 | 4.3E-124 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1446 | 1770 | 57.197002 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 33 | 99 | 13.31602 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 807 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 354 | - | - |
| Coils | Coil | Coil | 1091 | 1111 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010687592.2 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RAB9 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Spinacia oleracea OX=3562 GN=SOVF_088960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology