Basic Information
Locus ID:
BVRB_8g189020
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 21792594 | 21794283 | + | BVRB_8g189020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 41,422.67 Da | 54.93 | 78.87 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 71 | 328 | 4.03564E-140 | - |
| Pfam | PF00069 | Protein kinase domain | 74 | 328 | 2.4E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 334 | 7.69E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 364 | 2.6E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 42 | 152 | 1.7E-25 | - |
| SMART | SM00220 | serkin_6 | 73 | 328 | 3.0E-83 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 328 | 44.258514 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 102 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 186 | 198 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51660.1 | mitogen-activated protein kinase kinase 4. Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_010687279.1 | mitogen-activated protein kinase kinase 5 [Beta vulgaris subsp. vulgaris] | 0 |
| O80397 | Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MKK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3R0A3E6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_123560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology