Basic Information
Locus ID:
BVRB_8g187400
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12695751 | 12698268 | + | BVRB_8g187400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.57 | 10,037.60 Da | 37.08 | 95.39 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 3 | 43 | 2.1E-4 | IPR000210 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 89 | 1.6E-5 | IPR011333 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_048501160.1 | - | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LWD5 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g187400 |
| Brassicaceae | Brassica nigra | 1 | BniB08g041430.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11221 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00028356, Pov_00028402, Pov_00028412 |
| Poaceae | Thinopyrum elongatum | 5 | Tel5E01G694100, Tel5E01G694400, Tel5E01G787700 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG063870, gene_TRIDC4AG054000 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G362100.2, TraesCS5D02G511000.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35424 |
| Salicaceae | Populus euphratica | 1 | populus_peu34485 |