Basic Information
Locus ID:
BVRB_8g185980
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 8385986 | 8390099 | - | BVRB_8g185980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 56,661.75 Da | 37.84 | 88.67 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 41 | 360 | 6.7E-75 | IPR000490 |
| Pfam | PF07983 | X8 domain | 378 | 449 | 8.5E-21 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 41 | 360 | 4.53E-79 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 371 | 484 | 3.5E-11 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 40 | 367 | 9.9E-106 | - |
| SMART | SM00768 | X8_cls | 377 | 462 | 1.6E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 275 | 288 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010686818.1 | glucan endo-1,3-beta-glucosidase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9QUE2 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_140130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology