Basic Information
Locus ID:
BVRB_8g185560
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 7234270 | 7240574 | - | BVRB_8g185560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 77,025.40 Da | 44.52 | 90.51 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 410 | 681 | 9.58063E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 5.2E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 166 | 186 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 151 | 1.5E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 407 | 678 | 1.6E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 234 | 1.45E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 678 | 5.74E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 481 | 8.9E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 248 | 1.5E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 703 | 8.2E-59 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 681 | 38.293964 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_010686780.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZD9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_012130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology