Basic Information
Locus ID:
BVRB_8g183640
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3739849 | 3743560 | - | BVRB_8g183640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 47,410.96 Da | 52.30 | 60.29 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12274 | Protein of unknown function (DUF3615) | 308 | 398 | 2.8E-5 | IPR022059 |
| Pfam | PF12274 | Protein of unknown function (DUF3615) | 150 | 237 | 2.0E-7 | IPR022059 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010686548.1 | uncharacterized protein LOC104900742 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9QV64 | Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_138000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah000277, Ah000278, Ah024150 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_2g041740, BVRB_8g183620, BVRB_8g183640 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg55510, Sbi_jg61440, Sbi_jg62327 |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg193, Seu_jg26063, Seu_jg5922, Seu_jg899 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00013094, GOSA_00013095, GOSA_00014226 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000030096, gene:ENSEOMG00000031832 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.5AG0025560, CQ.Regalona.r1.5BG0025780 ... |