Basic Information
Locus ID:
BVRB_8g181940
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1442638 | 1447123 | - | BVRB_8g181940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 62,783.01 Da | 27.21 | 90.29 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 24 | 184 | 2.75517E-90 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 382 | 564 | 1.22311E-87 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 217 | 333 | 3.3E-23 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 20 | 186 | 1.3E-34 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 428 | 552 | 1.1E-14 | IPR011766 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 206 | 359 | 3.71E-34 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 20 | 196 | 7.52E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 382 | 576 | 5.54E-42 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 17 | 192 | 8.7E-59 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 207 | 369 | 3.8E-44 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 376 | 563 | 6.0E-56 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 17 | 576 | 9.7E-209 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_010686333.2 | - | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2ISH4 | pyruvate decarboxylase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology