Basic Information
Locus ID:
BVRB_7g175470
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
SNF1-like
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 42880218 | 42882519 | + | BVRB_7g175470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 31,229.73 Da | 37.83 | 89.34 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14003 | STKc_AMPK-like | 19 | 272 | 1.34098E-119 | - |
| Pfam | PF00069 | Protein kinase domain | 27 | 273 | 5.6E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 274 | 1.62E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 275 | 1.8E-95 | - |
| SMART | SM00220 | serkin_6 | 20 | 273 | 1.6E-99 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 23 | 270 | 2.1E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 273 | 47.42453 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 140 | 152 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29160.3 | SNF1 kinase homolog 11. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. | 0 |
| RefSeq | XP_010686185.2 | SNF1-related protein kinase catalytic subunit alpha KIN10 [Beta vulgaris subsp. vulgaris] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9QND5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_159550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7076 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028174 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g175470 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003033 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73108, Sgl76657 |