Basic Information
Locus ID:
BVRB_7g174620
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Glutelin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 42154399 | 42156493 | + | BVRB_7g174620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 38,833.02 Da | 30.46 | 88.12 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 2.76036E-78 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 172 | 1.0749E-66 | - |
| Pfam | PF00190 | Cupin | 201 | 333 | 1.2E-22 | IPR006045 |
| Pfam | PF00190 | Cupin | 11 | 154 | 7.1E-28 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 14 | 345 | 5.0E-50 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 8 | 178 | 1.0E-31 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 193 | 356 | 1.7E-52 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 1.9E-30 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 1.6E-17 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 9.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 9.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 9.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 9.4E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 9.4E-16 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_010685842.1 | - | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M5Y3 | 11-S seed storage protein, plant OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology