Basic Information
Locus ID:
BVRB_7g173590
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 41072762 | 41076146 | - | BVRB_7g173590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 35,464.59 Da | 49.32 | 62.51 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 14 | 185 | 2.3E-79 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 5 | 109 | 1.9E-44 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 110 | 183 | 3.3E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 215 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_010685726.1 | ubiquitin recognition factor in ER-associated degradation protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RTS1 | Ubiquitin fusion degradation protein 1 homolog OS=Spinacia oleracea OX=3562 GN=SOVF_030050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology