Basic Information
Locus ID:
BVRB_7g170320
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 37308774 | 37313992 | + | BVRB_7g170320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 84,983.04 Da | 52.39 | 72.21 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 506 | 759 | 4.3792E-90 | - |
| CDD | cd01989 | STK_N | 15 | 155 | 3.00715E-50 | - |
| Pfam | PF00069 | Protein kinase domain | 503 | 759 | 3.8E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 15 | 130 | 1.4E-6 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 130 | 3.35E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 479 | 761 | 4.45E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 770 | 1.1E-51 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 143 | 3.7E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 477 | 572 | 1.8E-24 | - |
| SMART | SM00220 | serkin_6 | 500 | 764 | 1.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 500 | 764 | 36.258671 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 618 | 630 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 324 | - | - |
| Coils | Coil | Coil | 371 | 391 | - | - |
| Coils | Coil | Coil | 444 | 464 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021864886.1 | U-box domain-containing protein 35-like isoform X2 [Spinacia oleracea] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LDB8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology