Basic Information
Locus ID:
BVRB_7g168170
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
neutrophil clearance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 33215355 | 33220599 | - | BVRB_7g168170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 96,383.13 Da | 44.39 | 88.63 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 576 | 691 | 2.6E-17 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 327 | 365 | 1.3E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 66 | 5.5E-5 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 95 | 129 | 4.0E-6 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 692 | 804 | 4.4E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 559 | 821 | 3.32E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 435 | 8.84E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 453 | 3.7E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 538 | 650 | 1.8E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 323 | 1.8E-71 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 685 | 823 | 4.0E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 140 | 165 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 212 | 0.096 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 307 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 115 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 391 | 415 | 89.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 573 | 810 | 15.382752 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 95 | 117 | 7.819765 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 579 | 601 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010685103.2 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8C077 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_7g168170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology