Basic Information
Locus ID:
BVRB_7g167780
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 32525363 | 32529017 | - | BVRB_7g167780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 11,515.62 Da | 30.98 | 55.92 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 25 | 98 | 8.06856E-47 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 27 | 97 | 1.0E-24 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 14 | 102 | 9.6E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 102 | 6.1E-38 | - |
| SMART | SM00213 | ubq_7 | 27 | 98 | 7.0E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 25 | 102 | 15.579509 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_010685033.1 | - | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KQ00 | Small ubiquitin-related modifier OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology