Basic Information
Locus ID:
BVRB_7g166930
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 29679885 | 29745059 | + | BVRB_7g166930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 112,660.65 Da | 38.69 | 97.13 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 705 | 967 | 9.42517E-97 | - |
| Pfam | PF13855 | Leucine rich repeat | 304 | 363 | 4.7E-8 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 439 | 623 | 3.1E-38 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 702 | 966 | 1.5E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 1000 | 4.18E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 107 | 419 | 1.73E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 404 | 3.2E-25 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 439 | 627 | 2.7E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 292 | 7.4E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 975 | 7.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 774 | 2.8E-36 | - |
| SMART | SM00220 | serkin_6 | 699 | 967 | 6.5E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 974 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 727 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_048504074.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology