Basic Information
Locus ID:
BVRB_7g166910
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 29613087 | 29652342 | + | BVRB_7g166910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 109,479.33 Da | 39.90 | 93.70 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 676 | 938 | 2.24885E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 673 | 937 | 3.7E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 267 | 308 | 7.7E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 408 | 592 | 6.4E-39 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 654 | 963 | 1.29E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 380 | 9.18E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 746 | 945 | 2.6E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 385 | 9.9E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 631 | 745 | 2.4E-35 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 408 | 596 | 1.1E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 261 | 4.7E-49 | IPR032675 |
| SMART | SM00220 | serkin_6 | 670 | 938 | 1.4E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 670 | 944 | 38.025421 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 676 | 698 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 790 | 802 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_048504074.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology