Basic Information
Locus ID:
BVRB_7g161170
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6997045 | 7022899 | - | BVRB_7g161170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 122,340.42 Da | 46.45 | 82.00 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 750 | 790 | 1.7964E-18 | - |
| Pfam | PF00628 | PHD-finger | 751 | 792 | 2.0E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 684 | 733 | 2.3E-15 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 344 | 399 | 1.6E-11 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 744 | 795 | 1.3E-14 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 838 | 892 | 1.01E-9 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 994 | 1082 | 8.12E-5 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 737 | 814 | 1.3E-17 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 815 | 903 | 2.7E-12 | IPR013083 |
| SMART | SM00249 | PHD_3 | 750 | 791 | 4.7E-11 | IPR001965 |
| SMART | SM00249 | PHD_3 | 838 | 894 | 9.8E-4 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 748 | 793 | 10.3978 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 751 | 790 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 296 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_010683978.2 | - | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QNE0 | PHD-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_164770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology