Basic Information
Locus ID:
BVRB_7g160730
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6193098 | 6204452 | + | BVRB_7g160730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 51,236.85 Da | 45.11 | 76.43 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 1 | 370 | 6.28153E-170 | - |
| Pfam | PF00069 | Protein kinase domain | 207 | 370 | 6.9E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 3 | 98 | 1.2E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 384 | 1.46E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 105 | 1.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 201 | 370 | 1.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 44 | 1.3E-35 | - |
| SMART | SM00220 | serkin_6 | 1 | 370 | 8.7E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 370 | 26.449673 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 86 | 98 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 196 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_010683926.2 | serine/threonine-protein kinase SRPK [Beta vulgaris subsp. vulgaris] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9REG8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_075680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology