Basic Information
Locus ID:
BVRB_6g153180
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 58186243 | 58191301 | + | BVRB_6g153180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 55,182.96 Da | 65.30 | 54.17 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 220 | 276 | 2.3E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 395 | 452 | 1.4E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 386 | 454 | 7.98E-30 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 217 | 278 | 4.71E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 379 | 455 | 2.2E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 204 | 279 | 8.7E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 394 | 453 | 6.3E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 219 | 277 | 1.3E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 389 | 454 | 38.377045 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 220 | 278 | 24.776325 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 365 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_010683088.1 | - | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MNJ9 | WRKY transcription factor 3 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology