Basic Information
Locus ID:
BVRB_6g152930
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 57702518 | 57708383 | + | BVRB_6g152930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 36,263.57 Da | 51.46 | 68.53 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 67 | 330 | 1.0E-81 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 224 | 320 | 2.65E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 221 | 333 | 1.4E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 226 | 323 | 26.647228 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 201 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_010683059.2 | auxin-responsive protein IAA9 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L1Z3 | Auxin-responsive protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology