Basic Information
Locus ID:
BVRB_6g151740
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 56139468 | 56143922 | + | BVRB_6g151740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 110,586.73 Da | 33.96 | 107.41 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 237 | 258 | 1.2 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 772 | 924 | 5.4E-30 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 619 | 641 | 1.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 61 | 2.0E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 81 | 666 | 5.1E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 750 | 1002 | 3.78E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 474 | 583 | 1.45E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 271 | 3.8E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 734 | 845 | 1.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 846 | 932 | 1.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 416 | 683 | 8.0E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 185 | 1.4E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 933 | 1007 | 3.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 401 | 7.4E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 113 | 137 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 323 | 347 | 390.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 770 | 1006 | 3.2E-13 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 545 | 569 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 593 | 617 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 641 | 667 | 250.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 770 | 1007 | 30.449596 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 890 | 902 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 776 | 798 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 593 | 606 | 5.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 350 | 363 | 5.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010682896.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LR58 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology