Basic Information
Locus ID:
BVRB_6g151610
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 56032737 | 56036743 | - | BVRB_6g151610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 54,765.01 Da | 43.52 | 78.72 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 227 | 260 | 5.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 226 | 259 | 2.62E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 267 | 363 | 4.87E-5 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 223 | 258 | 1.2E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 263 | 375 | 1.4E-10 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 211 | 258 | 8.755626 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 212 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_010682879.2 | F-box protein SKIP14 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6V1 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology