Basic Information
Locus ID:
BVRB_6g150830
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 54875336 | 54877423 | + | BVRB_6g150830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 45,326.81 Da | 42.95 | 66.42 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 342 | 381 | 6.9E-8 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 336 | 386 | 3.66E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 118 | 1.02E-5 | IPR036047 |
| SUPERFAMILY | SSF81901 | HCP-like | 129 | 246 | 1.96E-12 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 321 | 385 | 2.3E-11 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 121 | 259 | 2.3E-17 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 339 | 381 | 10.859447 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 416 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_010682773.1 | F-box protein At1g67340 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S0F6 | MYND-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_013430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology